学习经历
2012.09-2018.12 华中农业大学 农学博士;
2008.09-2012.06 怀化学院 农学学士。
工作经历
2025.06-至今,中国科学院西双版纳热带植物园,副研究员;
2022.02-2025.05,中国农业科学院农业基因组研究所,博士后;
2021.07-2021.12,美国史密森尼学会,Research Collaborator;
2019.06-2021.07,美国史密森尼学会,博士后。
代表论著
1. Zhang MY, Xu XD, Zhang TH, Liu ZY, Wang XY, Shi XY, Peng WJ, Wang X, Chen ZYF, Zhao RY, Wang WR, Zhang Y, Jin ZX, Zhou YF, Ma ZY*. The dynamics of wildVitis species in response to climate change facilitate the breeding of grapevine and its rootstocks with climate resilience. Horticulture Research. 2025. 12(7): uhaf104.
2. Zhang TH, Peng WJ, Xiao H, Cao S, Chen ZYF, Su XN, Luo YY, Liu ZY, Peng YL, Yang XP, Jiang GF, Xu XD*, Ma ZY*, Zhou YF*. Population genomic highlights structural variations in local adaptation to saline coastal environments in woollygrape. Journal of Integrative Plant Biology. 2024. doi:10.1111/jipb.13653.
3. Luo YY, Liu ZY, Jin ZX, Li P, Tan XB, Cao S, Wang X, Liu ZQ, Shi XY, Huang SY, Gu LY, Fan XC, Jiang JF, Sun L, Zhou YF, Liu CH, Xu XD*, Ma ZY*, Zhang Y*. Phased T2T genome assemblies facilitate the mining of disease-resistance genes inVitis davidii. Horticulture Research. 2024. doi:10.1093/hr/uhae306.
4. Liu Z, Wang N, Su Y, Long Q, Peng Y, Shang GY, Zhang F, Cao S, Wang X, Ge M, Xue H, Ma ZY, Liu WW, Xu XD, Li CC, Cao XJ,Ahmad B, Su XN, Liu YT, Huang GZ, Du MR, Liu ZY, Gan Y, Sun L, Fan XC, Zhang C, Zhong HX, Leng XP, Ren YH, Dong TY, Pei D, Wu XY, Jin ZX, Wang YW, Liu CH, Chen JF, Gaut B, Huang SW, Fang JG, Xiao H, Zhou Y. Grapevine pangenome facilitates trait genetics and genomic breeding.Nature Genetics. 2024. 56: 2804-2814.
5. Zhang F, Long RC, Ma ZY, Xiao H, Xu XD, Liu ZJ, Wei CX, Wang YW, Peng YL, Yang XW, Shi XY, Cao S, Li MN, Xu M, He F, Jiang XQ, Zhang TJ, Wang Z, Li XR, Yu LX, Kang JM, Zhang ZW, Zhou YF, Yang QC. Evolutionary genomics of climatic adaptation and resilience to climate change in alfalfa.Molecular Plant. 2024. 17: 867-883.
6. Yang X, Su Y, Huang S, Hou Q, Wei P, Hao Y,Huang J, Xiao H, Ma ZY, Xu XD, Wang X,Cao S,Cao XJ, Zhang MY, Wen XP, Ma YH, Peng YL, Zhou YF, Cao K, Qiao, G. (Comparative population genomics reveals convergent and divergent selection intheApricot-Peach-Plum-Mei (APPM)Complex. Horticulture Research.2024.11: uhae109.
7. Ma ZY, Nie ZL, Liu XQ, Tian JP, Zhou YF, Zimmer EA, Wen J. Phylogenetic relationships, hybridization events, and drivers of diversification of East Asian wild grapesasrevealedby phylogenomic analyses.Journal of Systematics and Evolution. 2023. 61(2): 273–283.
8. Wang N, Cao S, Liu ZJ, Xiao H, Hu J, Xu XD, Ma ZY, Ye JL, Chai LJ, Guo WW, Larkin RM, Xu Q, Morrell PL, Zhou YF, Deng XX. Genomic conservation of crop wild relatives:A case study of citrus. PLoS Genetics. 2023. 19: e1010811.
9. Nie ZL,Hodel R, Ma ZY, Johnson G, Chen R, Meng Y, Ickert-Bond SM, Liu XQ, Zimmer EA, Wen J. Climate-influenced boreotropical survival and rampant introgressions explain the thriving of New World grapes in the north temperate zone.Journal of Integrative Plant Biology. 2023. doi.org/10.1111/jipb.13466.
10. Talavera A, Nie ZL, Ma ZY, Johnson G, Ickert-Bond SM, Zimmer EA, Wen J. Phylogenomic analyses using a new 1013-gene Vitaceaebait-set support major groups of North American Vitis. 2023.Molecular Phylogenetics and Evolution 186.
11. Shi XY, Cao S, Wang X, Huang S, Wang Y, Liu ZJ, Liu WW, Leng X, Peng Y, Wang N, Wang YW, Ma ZY, Xu XD, Zhang F, Xue H, Zhong HX, Wang Y, Zhang KK, Velt A, Avia K,Holtgräwe D,GrimpletJ,Matus JT, Ware D, Xu XY, Wang HB, Liu CH, Fang YL, Rustenholz C, Cheng ZM, Xiao H, Zhou YF. The complete reference genome for grapevine (Vitis vinifera L.) genetics and breeding. Horticulture Research. 2023. 10: uhad061.
12. Ma ZY, Nie ZL, Chen R, Liu XQ, Zimmer EA, Wen J. Phylogenomic relationships and character evolution of the grape family (Vitaceae). Molecular Phylogenetics and Evolution. 2021. 154: 106948.
13. Ma ZY, Wen J, Qiang Fu, Liu XQ. Vitis shizishanensis, a new species of the grape genus from Hubei province, China. PhytoKeys. 2021. 184: 45–54.
14. Wen J and Ma ZY. 2021. On the recognition of the long neglected Vitis adenoclada Hand.-Mazz. (Vitaceae) from southern China. PhytoKeys, 179: 29-33.
15. Liu BB, Ma ZY, Ren C, Hodel RGJ, Sun M, Liu XQ, Liu GN, Hong DY, Zimmer EA, Wen J. Capturing single-copy nuclear genes, organellar genomes, and nuclear ribosomal DNA from deep genome skimming data for plant phylogenetics: A case study in Vitaceae. Journal of Systematics and Evolution. 2021. 59: 1124-1138.
16. Jamal A, Wen J, Ma ZY, Ahmed I, Abdullah, Chen LQ, Nie ZL, Liu XQ. Comparative chloroplast genome analyses of the winter-blooming eastern asian endemic genus Chimonanthus (Calycanthaceae) with implications for its phylogeny and diversification. Frontiers in Genetics. 2021.12: 709996. Doi: 10.3389/fgenet. 2021.709996.
17. Ma ZY, Wen J, Tian JP, Gui LL, Liu XQ. Testing morphological trait evolution and assessing species delimitations in the grape genus using a phylogenomic framework. Molecular Phylogenetics and Evolution. 2020. 148: 106809.
18. Tian JP, Ma ZY, Zhao KG, Zhang J, Xiang L, Chen LQ. Transcriptomic and proteomic approaches to explore the differences in monoterpene and benzenoid biosynthesis between scented and unscented genotypes of wintersweet. Physiologia Plantarum. 2019.166: 478-493.
19. Ma ZY, Wen J, Tian JP, Jamal A, Chen LQ, Liu XQ. Testing reticulate evolution of fourVitis species from East Asia using restriction-site associated DNA sequencing. Journal of Systematics and Evolution. 2018. 56(4): 331–339.
20. Ma ZY, Wen J, Ickert-Bond SM, Nie ZL, Chen LQ, Liu XQ. Phylogenomics, biogeography, and adaptive radiation of grapes. Molecular Phylogenetics and Evolution. 2018. 129: 258–267.
21. Ma ZY, Wen J, Ickert-Bond SM, Chen LQ, Liu XQ. Morphology, structure, andontogenyof trichomes of the grape genus(Vitis, Vitaceae). Frontiers in Plant Science. 2016. 7:704.
承担科研项目情况
国家自然科学基金青年科学基金项目(C类), 主持,国家级,2024.1-2026.12